Package: scatterbar 0.1.0

Dee Velazquez

scatterbar: Scattered Stacked Bar Chart Plots

Provides a powerful and flexible tool for visualizing proportional data across spatially resolved contexts. By combining the concepts of scatter plots and stacked bar charts, `scatterbar` allows users to create scattered bar chart plots, which effectively display the proportions of different categories at each (x, y) location. This visualization is particularly useful for applications where understanding the distribution of categories across spatial coordinates is essential. This package features automatic determination of optimal scaling factors based on data, customizable scaling and padding options for both x and y axes, flexibility to specify custom colors for each category, options to customize the legend title, and integration with `ggplot2` for robust and high-quality visualizations. For more details, see Velazquez et al. (2024) <doi:10.1101/2024.08.14.606810>.

Authors:Dee Velazquez [aut, cre], Jean Fan [aut, rev]

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scatterbar.pdf |scatterbar.html
scatterbar/json (API)
NEWS

# Install 'scatterbar' in R:
install.packages('scatterbar', repos = c('https://jefworks-lab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/jefworks-lab/scatterbar/issues

Pkgdown site:https://jef.works

Datasets:
  • adult_mouse_brain_ffpe - Deconvolved cell-type proportions from STdeconvolve for a Visium data from the adult mouse brain along with the positions of their respective spots
  • mOB - Deconvolved cell-type proportions from STdeconvolve for a Spatial Transcriptomic dataset of the mouse olfactory bulb along with the positions of their respective spots

On CRAN:

Conda:

data-visualizationspatial-analysisspatial-data-analysisspatial-transcriptomics

4.72 score 7 stars 15 scripts 175 downloads 1 exports 36 dependencies

Last updated 30 days agofrom:709f027405. Checks:1 ERROR, 8 WARNING. Indexed: yes.

TargetResultLatest binary
Doc / VignettesFAILApr 02 2025
R-4.5-winWARNINGApr 02 2025
R-4.5-macWARNINGApr 02 2025
R-4.5-linuxWARNINGApr 02 2025
R-4.4-winWARNINGApr 02 2025
R-4.4-macWARNINGApr 02 2025
R-4.4-linuxWARNINGApr 02 2025
R-4.3-winWARNINGApr 02 2025
R-4.3-macWARNINGApr 02 2025

Exports:scatterbar

Dependencies:clicolorspacecpp11dplyrfansifarvergenericsggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigpurrrR6RColorBrewerrlangscalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr