Package: scatterbar 0.1.0

Dee Velazquez

scatterbar: Scattered Stacked Bar Chart Plots

Provides a powerful and flexible tool for visualizing proportional data across spatially resolved contexts. By combining the concepts of scatter plots and stacked bar charts, `scatterbar` allows users to create scattered bar chart plots, which effectively display the proportions of different categories at each (x, y) location. This visualization is particularly useful for applications where understanding the distribution of categories across spatial coordinates is essential. This package features automatic determination of optimal scaling factors based on data, customizable scaling and padding options for both x and y axes, flexibility to specify custom colors for each category, options to customize the legend title, and integration with `ggplot2` for robust and high-quality visualizations. For more details, see Velazquez et al. (2024) <doi:10.1101/2024.08.14.606810>.

Authors:Dee Velazquez [aut, cre], Jean Fan [aut, rev]

scatterbar_0.1.0.tar.gz
scatterbar_0.1.0.zip(r-4.7)scatterbar_0.1.0.zip(r-4.6)scatterbar_0.1.0.zip(r-4.5)
scatterbar_0.1.0.tgz(r-4.6-any)scatterbar_0.1.0.tgz(r-4.5-any)
scatterbar_0.1.0.tar.gz(r-4.7-any)scatterbar_0.1.0.tar.gz(r-4.6-any)
scatterbar_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
scatterbar/json (API)
NEWS

# Install 'scatterbar' in R:
install.packages('scatterbar', repos = c('https://jefworks-lab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/jefworks-lab/scatterbar/issues

Pkgdown/docs site:https://jef.works

Datasets:
  • adult_mouse_brain_ffpe - Deconvolved cell-type proportions from STdeconvolve for a Visium data from the adult mouse brain along with the positions of their respective spots
  • mOB - Deconvolved cell-type proportions from STdeconvolve for a Spatial Transcriptomic dataset of the mouse olfactory bulb along with the positions of their respective spots

On CRAN:

Conda:

data-visualizationspatial-analysisspatial-data-analysisspatial-transcriptomics

6.01 score 11 stars 31 scripts 193 downloads 1 exports 29 dependencies

Last updated from:709f027405. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK170
source / vignettesOK288
linux-release-x86_64OK176
macos-release-arm64OK125
macos-oldrel-arm64OK135
windows-develOK120
windows-releaseOK120
windows-oldrelOK119
wasm-releaseOK118

Exports:scatterbar

Dependencies:clicpp11dplyrfarvergenericsggplot2gluegtableisobandlabelinglifecyclemagrittrpillarpkgconfigpurrrR6RColorBrewerrlangS7scalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr

Customizing scatterbar

Rendered fromcustomizing_scatterbar.Rmdusingknitr::rmarkdownon May 08 2026.

Last update: 2024-11-26
Started: 2024-06-27

Flipping scatterbar oreintations and positions

Rendered fromflipping-scatterbar-oreintations.Rmdusingknitr::rmarkdownon May 08 2026.

Last update: 2024-11-26
Started: 2024-11-13

Getting started with scatterbars

Rendered fromgetting-started-with-scatterbars.Rmdusingknitr::rmarkdownon May 08 2026.

Last update: 2024-11-26
Started: 2024-06-13

Using scatterbar with a SpatialExperiment object

Rendered fromusing-scatterbar-with-spatial-experiment.Rmdusingknitr::rmarkdownon May 08 2026.

Last update: 2024-11-26
Started: 2024-10-16

Using scatterbar with Visium data

Rendered fromusing-scatterbar-with-visium.Rmdusingknitr::rmarkdownon May 08 2026.

Last update: 2024-11-26
Started: 2024-10-16

Visualizing multiple datasets with scatterbar

Rendered fromvisualizing-multiple-datasets.Rmdusingknitr::rmarkdownon May 08 2026.

Last update: 2024-11-26
Started: 2024-10-16